09. Feb 2000
Scan for sequence pattern (PROSITE)
The amino acid sequence of the current layer can be searched for the occurence of specific sequence pattern, e.g. glycosylation sites etc. Use the "Find Sequence" menu to input a search pattern. The search string can be a PROSITE pattern.
It is possible to scan the current layer sequence against all prosite pattern. The current prosite pattern file prosite.dat can be downloaded from
Copy this file into your "spdbv/usrstuff" directory, then use the "Search for prosite pattern" function in the "Edit" menu.