! MolScript v2.1 input file ! generated by MolAuto v1.0 ! modified by hand ! VRML frames example, minimal quality. title "c-H-Ras p21 protein (1-166), comples with GDP, Mg" plot read mol "ras.pdb"; set segments 2, strandthickness 0, coilradius 0; set planecolour green; helix from 15 to 24; helix from 66 to 74; helix from 88 to 103; helix from 126 to 134; helix from 152 to 165; set planecolour red; strand from 2 to 10; strand from 38 to 45; strand from 50 to 57; strand from 77 to 81; strand from 111 to 115; strand from 140 to 143; set planecolour purple; anchor "ras_loops_text.html" description "effector loops" parameter "target=text" { coil from 24 to 38; coil from 57 to 66; }; set planecolour yellow; coil from 1 to 2; turn from 10 to 15; coil from 45 to 50; coil from 74 to 77; coil from 81 to 88; coil from 103 to 111; coil from 115 to 126; coil from 134 to 140; coil from 143 to 152; coil from 165 to 166; set colourparts on; bonds require not hydrogens and in type HOH; anchor "ras_gdp_text.html" description "GDP molecule" parameter "target=text" { bonds in type GDP; }; anchor "ras_mg_text.html" description "Mg ion" parameter "target=text" { bonds in type MG; }; viewpoint "GDP molecule" from position require in type GDP and atom N* to position require in type GDP and atom P* 10; viewpoint "Mg ion" from position in require type HOH and either residue 3 or residue 2 to position in type MG 10; viewpoint "far away" origin position in type GDP 100; end_plot